Explore Bioinformatics
Bioinformatics
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Genomic analysis
Functionality : Analysis of human genomic data – the genomic variant calling pipeline. -
BBMap
Functionality : BBMap is a bioinformatics toolkit that includes several alignment procedures. We specifically targeted the \textbf{BBMap.align -
dnapars: an open-source bioinformatics program
Functionality : Infer evolutionary relationships among taxa using aligned sequences of characters, typically DNA or amino acids. -
Deterministic network simulation component of GNLab
Functionality : A command-line tool for large-scale analysis and simulation of gene regulatory networks (GRNs) -
SeqMap
Functionality : Perform short sequence mapping by solving an approximate string matching problem -
dnapars and dnapenny
Functionality : Implement the maximum parsimony method to construct Phylogenetic trees -
dnaml
Functionality : generate trees with the highest “likelihood” against an evolutionary model